Improving the genome sequence of D. simulans via co-assembly of multiple strains
Improving the genome sequence of D. simulans via co-assembly of multiple strains
Adam Phillippy, Michael Schatz, Timur Chabuk, Bo Liu, Robert Patro and Steven Salzberg
Biology of Genomes, Cold Spring Harbor, 2009
[bibtex]
Saliency Guided Summarization of Molecular Dynamics Simulations
Saliency Guided Summarization of Molecular Dynamics Simulation
Robert Patro, Cheuk Yiu Ip and Amitabh Varshney
Scientific Visualization: Advanced Concepts , Schloss Dagstuhl -- Leibniz Center for Informatics 2010
[bibtex]
Modeling and Visualization of Human Activities for Multicamera Networks
Modeling and Visualization of Human Activities for Multicamera Networks
Aswin Sankaranarayanan, Robert Patro, Pavan Turaga, Amitabh Varshney, and Rama Chellappa
EURASIP Journal on Image and Video Processing, 2009
[bibtex]
Salient Frame Detection for Molecular Dynamics Simulations
Salient Frame Detection for Molecular Dynamics Simulations
Youngmin Kim, Robert Patro, Cheuk Yiu Ip, Andriy Anishkin, Sergei Sukharev, Dianne P. O' Leary, Amitabh Varshney
Scientific Visualization: Interactions, Features, Metaphors, Dagstuhl Follow-Ups Vol. 2, 2011, pp 160 - 175
[bibtex]
A Robust and Rotationally Invariant Local Surface Descriptor with Applications to Non-local Mesh Processing
A Robust and Rotationally Invariant Local Surface Descriptor with Applications to Non-local Mesh Processing
André Maximo, Robert Patro, Amitabh Varshney, Ricardo Farias
Graphical Models, Volume 73, Issue 5, September 2011, Pages 231-242, ISSN 1524-0703
[bibtex]
Social Snapshot: A System for Temporally Coupled Social Photography
Social Snapshot: A System for Temporally Coupled Social Photograph
Robert Patro, Cheuk Yiu Ip, Sujal Bista, and Amitabh Varshney
IEEE Computer Graphics and Applications, Vol. 31, Nr. 1 (2011) , p. 74-84.
[bibtex]
MDMap: A System for Data-Driven Layout and Exploration of Molecular Dynamics Simulations
MDMap : A System for Data-driven Layout and Exploration of Molecular Dynamics Simulations
Robert Patro, Cheuk Yiu Ip, Sujal Bista, Sam Cho, Dave Thirumalai and Amitabh Varshney
In proceedings of BioVis 2011: 1st IEEE Symposium on biological data visualization, Providence, Rhode Island, USA, IEEE, Oct. 2011
[bibtex]
Parsimonious Reconstruction of Network Evolution
Parsimonious Reconstruction of Network Evolution
Robert Patro, Emre Sefer, Justin Malin, Guillaume Marçias, Saket Navlakha and Carl Kinsgford
WABI 2011, LNCS 6833, pages 237-249. [Software]
[bibtex]
Learning from Diversity: Epitope Prediction with Sequence and Structure Features using an Ensemble of Support Vector Machines
Learning from Diversity: Epitope Prediction with Sequence and Structure Features using an Ensemble of Support Vector Machines
Robert Patro and Carl Kinsgford
Winner, DREAM5 Challenge 1 competition. Presented at RECOMB Systems Biology Satellite Conference.
[bibtex]
Global Network Alignment Using Multiscale Spectral Signatures
Global Network Alignment Using Multiscale Spectral Signatures Robert Patro and Carl Kinsgford
Under Review [preprint] [Software]
[bibtex]